Information for motif40


Reverse Opposite:

p-value:1e-10
log p-value:-2.417e+01
Information Content per bp:1.650
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif10.17%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif1.58%
Average Position of motif in Targets91.9 +/- 57.7bp
Average Position of motif in Background121.3 +/- 40.8bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CACYGATA-------
TAAACTGATAAGAAGAT

MA0036.2_GATA2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CACYGATA-------
-NCAGATAAGAANNN

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CACYGATA---
-NBWGATAAGR

MA0035.3_Gata1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACYGATA----
-ANAGATAAGAA

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CACYGATA---
---AGATAASR

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACYGATA-
GCAGTGATTT

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CACYGATA----
--CAGATAAGGN

MA0482.1_Gata4/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACYGATA---
NNGAGATAAGA

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CACYGATA----
--NAGATAAGNN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CACYGATA---
-ACTGAAACCA