Information for motif43


Reverse Opposite:

p-value:1e-8
log p-value:-1.993e+01
Information Content per bp:1.455
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif9.04%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif1.60%
Average Position of motif in Targets89.7 +/- 56.6bp
Average Position of motif in Background141.6 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0056.1_MZF1_1-4/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGGAATCGAT
TGGGGA------

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGGAATCGAT
CSTGGGAAAD---

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGGAATCGAT
CWGGCGGGAA-----

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGGAATCGAT
GGCGGGAARN---

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGGAATCGAT--
--DGATCRATAN

MA0081.1_SPIB/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGAATCGAT
AGAGGAA-----

MA0471.1_E2F6/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGGAATCGAT
GGGCGGGAAGG---

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGGAATCGAT
CCWGGAATGY--

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGGAATCGAT
NCTGGAATGC--

GFY(?)/Promoter/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGGAATCGAT--
GGGAATTGTAGT