Information for motif46


Reverse Opposite:

p-value:1e-5
log p-value:-1.229e+01
Information Content per bp:1.530
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif6.78%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif1.33%
Average Position of motif in Targets100.1 +/- 58.2bp
Average Position of motif in Background86.7 +/- 37.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCCTAACG
AGGTCTCTAACC

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCCTAACG-
ATGCCCTGAGGC

MA0057.1_MZF1_5-13/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCCTAACG
TTCCCCCTAC--

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCCTAACG-
WTGSCCTSAGGS

MA0003.2_TFAP2A/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCCTAACG-----
TGCCCTGAGGCANTN

MA0155.1_INSM1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCCTAACG
CGCCCCCTGACA

PB0128.1_Gcm1_2/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CCCTAACG---
NTCNTCCCCTATNNGNN

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCCTAACG----
--NHAACBGYYV

MA0524.1_TFAP2C/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCCTAACG-----
TGCCCTGGGGCNANN

MA0597.1_THAP1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCCTAACG
CTGCCCGCA--