Information for motif11


Reverse Opposite:

p-value:1e-282
log p-value:-6.516e+02
Information Content per bp:1.895
Number of Target Sequences with motif353.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets102.8 +/- 55.3bp
Average Position of motif in Background108.4 +/- 69.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0597.1_THAP1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGCCCGCAGC
CTGCCCGCA--

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CGCCCGCAGC---
TCGTACCCGCATCATT

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CGCCCGCAGC
----CACAGN

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CGCCCGCAGC-
------CAGCC

MA0048.1_NHLH1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CGCCCGCAGC-----
---GCGCAGCTGCGT

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGCCCGCAGC---
ATTGCCTCAGGCAAT

MA0117.1_Mafb/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGCCCGCAGC
--NCGTCAGC

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CGCCCGCAGC
----CGGAGC

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCGCAGC
YCCGCCCACGCN

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCGCAGC--
GGTCCCGCCCCCTTCTC