Information for motif18


Reverse Opposite:

p-value:1e-192
log p-value:-4.430e+02
Information Content per bp:1.530
Number of Target Sequences with motif131.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.4 +/- 55.9bp
Average Position of motif in Background159.8 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGCCGCGGTGGC
CACCCCCGGGGGGG

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CGCCGCGGTGGC
CCCCCCCGGGGGGGT

PB0010.1_Egr1_1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CGCCGCGGTGGC---
-ANTGCGGGGGCGGN

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CGCCGCGGTGGC
-GGCGCGCT---

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGCCGCGGTGGC-
ACCCCCCCGGGGGGN

MA0048.1_NHLH1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CGCCGCGGTGGC
GCGCAGCTGCGT-

MA0162.2_EGR1/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CGCCGCGGTGGC-----
---GGCGGGGGCGGGGG

MA0130.1_ZNF354C/Jaspar

Match Rank:8
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CGCCGCGGTGGC-
-------GTGGAT

MA0146.2_Zfx/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CGCCGCGGTGGC
CAGGCCNNGGCCNN

MA0161.1_NFIC/Jaspar

Match Rank:10
Score:0.49
Offset:7
Orientation:forward strand
Alignment:CGCCGCGGTGGC-
-------TTGGCA