Information for motif19


Reverse Opposite:

p-value:1e-142
log p-value:-3.284e+02
Information Content per bp:1.944
Number of Target Sequences with motif253.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif17.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets105.2 +/- 48.4bp
Average Position of motif in Background82.2 +/- 46.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----AGGTGGCGCT--
GCGGAGGTGTCGCCTC

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------AGGTGGCGCT----
GCCASCAGGGGGCGCYVNNG

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGGCGCT
NNCAGGTGNN---

MA0139.1_CTCF/Jaspar

Match Rank:4
Score:0.66
Offset:-8
Orientation:forward strand
Alignment:--------AGGTGGCGCT-
TGGCCACCAGGGGGCGCTA

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:5
Score:0.64
Offset:-8
Orientation:reverse strand
Alignment:--------AGGTGGCGCT--
TGGCCACCAGGTGGCACTNT

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGGCGCT---
NNNAAGGGGGCGGGNNN

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGGTGGCGCT-
AGGGGGCGGGGCTG

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGTGGCGCT
AGGTGTCA--

MA0130.1_ZNF354C/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGGTGGCGCT
--GTGGAT--

MA0461.1_Atoh1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGTGGCGCT
CAGATGGC---