Information for motif20


Reverse Opposite:

p-value:1e-141
log p-value:-3.249e+02
Information Content per bp:1.927
Number of Target Sequences with motif239.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets89.8 +/- 55.5bp
Average Position of motif in Background119.3 +/- 118.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0527.1_ZBTB33/Jaspar

Match Rank:1
Score:0.91
Offset:-6
Orientation:reverse strand
Alignment:------TCGCGAGA-
NAGNTCTCGCGAGAN

GFX(?)/Promoter/Homer

Match Rank:2
Score:0.89
Offset:-4
Orientation:forward strand
Alignment:----TCGCGAGA
ATTCTCGCGAGA

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.87
Offset:-5
Orientation:forward strand
Alignment:-----TCGCGAGA--
GGNTCTCGCGAGAAC

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCGCGAGA----
TGGCGGGAAAHB

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCGCGAGA---
-GGCGGGAARN

E2F(E2F)/Cell-Cycle-Exp/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCGCGAGA---
TTCGCGCGAAAA

MA0470.1_E2F4/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCGCGAGA---
GGGCGGGAAGG

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCGCGAGA---
-GGCGGGAAAH

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCGCGAGA-----
GNNACCGAGAATNNN

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCGCGAGA-----
TTGACCGAGAATTCC