Information for motif3


Reverse Opposite:

p-value:1e-798
log p-value:-1.839e+03
Information Content per bp:1.724
Number of Target Sequences with motif5979.0
Percentage of Target Sequences with motif16.99%
Number of Background Sequences with motif1503.1
Percentage of Background Sequences with motif7.28%
Average Position of motif in Targets99.7 +/- 53.5bp
Average Position of motif in Background98.6 +/- 165.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGGGGCY
GGGGGCGGGGCC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---GGGCGGGGCY-
AGGGGGCGGGGCTG

MA0516.1_SP2/Jaspar

Match Rank:3
Score:0.90
Offset:-6
Orientation:reverse strand
Alignment:------GGGCGGGGCY
GGGNGGGGGCGGGGC-

MA0599.1_KLF5/Jaspar

Match Rank:4
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-GGGCGGGGCY
GGGGNGGGGC-

MA0079.3_SP1/Jaspar

Match Rank:5
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGGGGCY
GGGGGCGGGGC-

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.88
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGGGGCY--
NNAGGGGCGGGGTNNA

MA0039.2_Klf4/Jaspar

Match Rank:7
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GGGCGGGGCY
TGGGTGGGGC-

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GGGCGGGGCY
DGGGYGKGGC-

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GGGCGGGGCY
GGGCGGGACC

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCGGGGCY--
NAGANTGGCGGGGNGNA