Information for motif9


Reverse Opposite:

p-value:1e-325
log p-value:-7.492e+02
Information Content per bp:1.920
Number of Target Sequences with motif198.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets100.2 +/- 54.5bp
Average Position of motif in Background64.9 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:forward strand
Alignment:ACTACAWTTCCC
ACTACAATTCCC

GFY-Staf/Promoters/Homer

Match Rank:2
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-ACTACAWTTCCC-------
AACTACAATTCCCAGAATGC

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ACTACAWTTCCC
ATTTACGACAAATAGC

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACTACAWTTCCC
NWAACCACADNN---

MA0511.1_RUNX2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACTACAWTTCCC
CAAACCACAAACCCC

MA0056.1_MZF1_1-4/Jaspar

Match Rank:6
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:ACTACAWTTCCC--
--------TCCCCA

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ACTACAWTTCCC
NAAACCACAG-----

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------ACTACAWTTCCC
AATCGCACTGCATTCCG-

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ACTACAWTTCCC---
-----HTTTCCCASG

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ACTACAWTTCCC
NNCNNAACAATTNT-