Information for motif14


Reverse Opposite:

p-value:1e-59
log p-value:-1.375e+02
Information Content per bp:1.478
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets104.9 +/- 53.8bp
Average Position of motif in Background116.6 +/- 49.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0507.1_POU2F2/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-TCATTTGCNTAA
TTCATTTGCATAT

PH0144.1_Pou2f2/Jaspar

Match Rank:2
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TCATTTGCNTAA--
TNTAATTTGCATANNN

PH0145.1_Pou2f3/Jaspar

Match Rank:3
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TCATTTGCNTAA--
TNTAATTTGCATACNA

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.80
Offset:2
Orientation:forward strand
Alignment:TCATTTGCNTAA
--ATTTGCATAA

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:TCATTTGCNTAA
--ATTTGCATAT

OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TCATTTGCNTAA-----
--ATTTGCATAACAATG

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCATTTGCNTAA--
ANTCCTTTGTCTNNNN

MA0142.1_Pou5f1::Sox2/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCATTTGCNTAA-----
--ATTTGCATAACAAAG

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCATTTGCNTAA
GTTTCACTTCCG---

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TCATTTGCNTAA
---ATTGCATAA