Information for motif23


Reverse Opposite:

p-value:1e-15
log p-value:-3.472e+01
Information Content per bp:1.973
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets86.3 +/- 56.7bp
Average Position of motif in Background118.2 +/- 44.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GAAGAAAGCG---
AGAAGAACAAAGGACTA

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAAGAAAGCG
NGAAGC-----

MA0514.1_Sox3/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAAGAAAGCG
AAAACAAAGG-

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAAGAAAGCG---
ATAAGAACAAAGGACTA

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GAAGAAAGCG
TACTGGAAAAAAAA-

MA0474.1_Erg/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAGAAAGCG-
ACAGGAAGTGG

MA0442.1_SOX10/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GAAGAAAGCG
--ACAAAG--

MA0475.1_FLI1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAGAAAGCG-
ACAGGAAGTGG

MA0051.1_IRF2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAAGAAAGCG----------
--GGAAAGCGAAACCAAAAC

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAGAAAGCG----
GGAGAAAGGTGCGA