Information for motif11


Reverse Opposite:

p-value:1e-307
log p-value:-7.090e+02
Information Content per bp:1.501
Number of Target Sequences with motif2606.0
Percentage of Target Sequences with motif6.47%
Number of Background Sequences with motif706.5
Percentage of Background Sequences with motif2.86%
Average Position of motif in Targets100.1 +/- 53.0bp
Average Position of motif in Background102.0 +/- 47.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0046.1_HNF1A/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GTTAATSATT---
GGTTAATAATTAAC

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GTTAATSATT
GKTAATGR--

MA0153.1_HNF1B/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTTAATSATT--
GTTAAATATTAA

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GTTAATSATT--
GGTTAAACATTAA

PH0035.1_Gsc/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GTTAATSATT---
AATCGTTAATCCCTTTA

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTTAATSATT
GCTAATCC--

PH0137.1_Pitx1/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GTTAATSATT----
NTTGTTAATCCCTCTNN

MA0132.1_Pdx1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTTAATSATT
-CTAATT---

PH0123.1_Obox3/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTTAATSATT----
ATAGTTAATCCCCCNNA

PH0096.1_Lhx6_1/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GTTAATSATT---
GAGCGTTAATTAATGTA