Information for motif12


Reverse Opposite:

p-value:1e-269
log p-value:-6.211e+02
Information Content per bp:1.840
Number of Target Sequences with motif169.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets103.5 +/- 54.8bp
Average Position of motif in Background162.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTGCGCG--
NNGCNCTGCGCGGC

MA0506.1_NRF1/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CCCTTGCGCG
GCGCCTGCGCA

NRF1/Promoter/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTGCGCG-
GCGCATGCGCAC

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCCTTGCGCG
CTGCGCATGCGC-

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCCTTGCGCG---
---TTGCGTGCVA

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCCTTGCGCG-------
--NTCGCGCGCCTTNNN

PB0095.1_Zfp161_1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTGCGCG-----
NCANGCGCGCGCGCCA

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CCCTTGCGCG
----TGCGTG

E2F(E2F)/Cell-Cycle-Exp/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCCTTGCGCG----
--TTTTCGCGCGAA

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCCTTGCGCG-------
--ANCGCGCGCCCTTNN