Information for motif15


Reverse Opposite:

p-value:1e-213
log p-value:-4.913e+02
Information Content per bp:1.910
Number of Target Sequences with motif245.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets99.2 +/- 52.7bp
Average Position of motif in Background139.3 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:forward strand
Alignment:ACTACAATTCCC
ACTACAATTCCC

GFY-Staf/Promoters/Homer

Match Rank:2
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-ACTACAATTCCC-------
AACTACAATTCCCAGAATGC

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ACTACAATTCCC
ATTTACGACAAATAGC

MA0511.1_RUNX2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACTACAATTCCC
CAAACCACAAACCCC

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACTACAATTCCC
NWAACCACADNN---

MA0056.1_MZF1_1-4/Jaspar

Match Rank:6
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:ACTACAATTCCC--
--------TCCCCA

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACTACAATTCCC
NAAACCACAG-----

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ACTACAATTCCC
AAACCACAGC----

PB0165.1_Sox11_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ACTACAATTCCC
NNCNNAACAATTNT-

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----ACTACAATTCCC
ATGTCACAACAACAC--