Information for motif18


Reverse Opposite:

p-value:1e-180
log p-value:-4.162e+02
Information Content per bp:1.703
Number of Target Sequences with motif146.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets96.9 +/- 55.2bp
Average Position of motif in Background157.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0146.2_Zfx/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CGCGGCCTGGCG
GGGGCCGAGGCCTG---

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CGCGGCCTGGCG
--AGGCCTAG--

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGCGGCCTGGCG
--AGGCCTNG--

MA0524.1_TFAP2C/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGCGGCCTGGCG-----
--TGCCCTGGGGCNANN

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CGCGGCCTGGCG--
CNNBRGCGCCCCCTGSTGGC

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGCGGCCTGGCG
GGGGGCGGGGCC

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CGCGGCCTGGCG-------
--NAGANTGGCGGGGNGNA

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.51
Offset:-8
Orientation:reverse strand
Alignment:--------CGCGGCCTGGCG
NNGCNCTGCGCGGC------

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CGCGGCCTGGCG
ANCGCGCGCCCTTNN-

MA0139.1_CTCF/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CGCGGCCTGGCG----
TAGCGCCCCCTGGTGGCCA