Information for motif23


Reverse Opposite:

p-value:1e-102
log p-value:-2.370e+02
Information Content per bp:1.933
Number of Target Sequences with motif239.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif24.2
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets104.2 +/- 54.8bp
Average Position of motif in Background111.0 +/- 101.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0028.1_ELK1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CCGTCCGG---
-CTTCCGGNNN

MF0001.1_ETS_class/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCGTCCGG-
-CTTCCGGT

MA0131.1_HINFP/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCGTCCGG
TAACGTCCGC

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCGTCCGG
CTGTCTGG

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCGTCCGG--
ACTTCCGGNT

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCGTCCGG-
HACTTCCGGY

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCGTCCGG
VBSYGTCTGG

MA0062.2_GABPA/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCGTCCGG
NCCACTTCCGG

ETS(ETS)/Promoter/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCGTCCGG--
ACTTCCGGTT

MA0076.2_ELK4/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCGTCCGG-
CCACTTCCGGC