Information for motif4


Reverse Opposite:

p-value:1e-642
log p-value:-1.478e+03
Information Content per bp:1.737
Number of Target Sequences with motif3838.0
Percentage of Target Sequences with motif9.53%
Number of Background Sequences with motif873.0
Percentage of Background Sequences with motif3.53%
Average Position of motif in Targets99.6 +/- 54.3bp
Average Position of motif in Background104.3 +/- 175.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGGAGCC
GGGGGCGGGGCC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---GGGCGGAGCC-
AGGGGGCGGGGCTG

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGGAGCC
GGGGGCGGGGC-

MA0516.1_SP2/Jaspar

Match Rank:4
Score:0.85
Offset:-6
Orientation:reverse strand
Alignment:------GGGCGGAGCC
GGGNGGGGGCGGGGC-

MA0599.1_KLF5/Jaspar

Match Rank:5
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-GGGCGGAGCC
GGGGNGGGGC-

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGGAGCC--
NNAGGGGCGGGGTNNA

MA0039.2_Klf4/Jaspar

Match Rank:7
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GGGCGGAGCC
TGGGTGGGGC-

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GGGCGGAGCC
GGGCGGGACC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GGGCGGAGCC
DGGGYGKGGC-

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCGGAGCC--
NAGANTGGCGGGGNGNA