Information for motif7


Reverse Opposite:

p-value:1e-419
log p-value:-9.659e+02
Information Content per bp:1.711
Number of Target Sequences with motif305.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.8 +/- 55.3bp
Average Position of motif in Background134.1 +/- 38.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:CCGGGCGCGCTG
---GGCGCGCT-

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCGGGCGCGCTG-
ATAAAGGCGCGCGAT

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCGGGCGCGCTG-
ATAAGGGCGCGCGAT

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCGGGCGCGCTG----
TGGCGCGCGCGCCTGA

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCGGGCGCGCTG--
TTGGGGGCGCCCCTAG

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCGGGCGCGCTG-----
---GCCGCGCAGTGCGT

MA0024.2_E2F1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCGGGCGCGCTG
-CGGGCGGGAGG

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCGGGCGCGCTG
ATGCCCGGGCATGT--

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCGGGCGCGCTG
ANTGCGGGGGCGGN-

PB0103.1_Zic3_1/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CCGGGCGCGCTG
CCCCCCCGGGGGGGT--