Information for motif8


Reverse Opposite:

p-value:1e-398
log p-value:-9.181e+02
Information Content per bp:1.679
Number of Target Sequences with motif9052.0
Percentage of Target Sequences with motif22.48%
Number of Background Sequences with motif3585.5
Percentage of Background Sequences with motif14.49%
Average Position of motif in Targets98.9 +/- 54.4bp
Average Position of motif in Background98.1 +/- 110.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.92
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGWGH
CCCCCTGCTGTG-

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGWGH--
TNTCCTGCTGTGNNG

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGWGH--
NNTCCTGCTGTGNNN

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGWGH--
TCNCCTGCTGNGNNN

MA0461.1_Atoh1/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCTGCTGWGH
GCCATCTG---

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CCTGCTGWGH
---GCTGTG-

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCTGCTGWGH
HCAGCTGDTN

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCTGCTGWGH
-CAGCTGNT-

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCTGWGH
CAGCAGCTGN--

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCTGCTGWGH
-CAGCTGTT-