Information for motif9


Reverse Opposite:

p-value:1e-360
log p-value:-8.310e+02
Information Content per bp:1.714
Number of Target Sequences with motif213.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets99.8 +/- 56.8bp
Average Position of motif in Background139.5 +/- 0.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGGGAKCCCG
-CGGAGC---

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGGGAKCCCG
GGGCGGGACC---

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGGGAKCCCG-
-GGGAGGACNG

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CGGGAKCCCG---
NNNGGGGCGCCCCCNN

MA0469.1_E2F3/Jaspar

Match Rank:5
Score:0.57
Offset:-9
Orientation:reverse strand
Alignment:---------CGGGAKCCCG
NNGTGNGGGCGGGAG----

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGGGAKCCCG----
TGTCGTGACCCCTTAAT

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGGGAKCCCG
ANCAGGATGT--

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGGGAKCCCG
GGCGGGAARN--

MA0470.1_E2F4/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGGGAKCCCG
GGGCGGGAAGG--

MA0471.1_E2F6/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CGGGAKCCCG
GGGCGGGAAGG--