cmd = Peak_Sets/delHx-Specific.1.5.Middle.bed mm10 Motifs/delHx-Specific.1.5.Middle.BG -size 200 -mask -preparsedDir Motifs/delHx-Specific.1.5.Middle.BG/PP -p 16 -bg Peak_Sets/delHx-Specific.1.5.Middle.BG.bed