Information for motif12


Reverse Opposite:

p-value:1e-117
log p-value:-2.708e+02
Information Content per bp:1.822
Number of Target Sequences with motif1482.0
Percentage of Target Sequences with motif3.68%
Number of Background Sequences with motif763.5
Percentage of Background Sequences with motif1.91%
Average Position of motif in Targets98.5 +/- 53.5bp
Average Position of motif in Background102.4 +/- 61.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GTCAATAG-
TATGTAAACANG

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTCAATAG
GTAAACAG

MA0047.2_Foxa2/Jaspar

Match Rank:3
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----GTCAATAG
NCTAAGTAAACA-

PB0197.1_Zfp105_2/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GTCAATAG-----
ATGGTTCAATAATTTTG

MA0078.1_Sox17/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTCAATAG-
GACAATGNN

MA0148.3_FOXA1/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GTCAATAG---
CAAAGTAAACANNNN

MA0480.1_Foxo1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTCAATAG--
TGTAAACAGGA

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GTCAATAG
AAAGTAAACA-

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTCAATAG
AAAGTAAACA-

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.66
Offset:-8
Orientation:forward strand
Alignment:--------GTCAATAG
AAAGACCTGTCAATAC