Information for motif16


Reverse Opposite:

p-value:1e-40
log p-value:-9.225e+01
Information Content per bp:1.878
Number of Target Sequences with motif273.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif108.0
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets99.3 +/- 52.1bp
Average Position of motif in Background87.4 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.99
Offset:0
Orientation:forward strand
Alignment:ACTACAATTCCC
ACTACAATTCCC

GFY-Staf/Promoters/Homer

Match Rank:2
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-ACTACAATTCCC-------
AACTACAATTCCCAGAATGC

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ACTACAATTCCC
ATTTACGACAAATAGC

MA0511.1_RUNX2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACTACAATTCCC
CAAACCACAAACCCC

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ACTACAATTCCC
NWAACCACADNN---

MA0056.1_MZF1_1-4/Jaspar

Match Rank:6
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:ACTACAATTCCC--
--------TCCCCA

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ACTACAATTCCC--
----CACTTCCTCT

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ACTACAATTCCC
NNCNNAACAATTNT-

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ACTACAATTCCC
NAAACCACAG-----

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ACTACAATTCCC-----
---NNACTTCCTCTTNN