Information for motif19


Reverse Opposite:

p-value:1e-17
log p-value:-4.065e+01
Information Content per bp:1.691
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets98.1 +/- 55.5bp
Average Position of motif in Background94.9 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0468.1_DUX4/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AACAACCTAATC-
--TAATTTAATCA

PH0026.1_Duxbl/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AACAACCTAATC-------
--CGACCCAATCAACGGTG

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:AACAACCTAATC-
-----GCTAATCC

PB0185.1_Tcf1_2/Jaspar

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:AACAACCTAATC-------
-----NNTAATCCNGNCNN

PH0035.1_Gsc/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AACAACCTAATC------
-AATCGTTAATCCCTTTA

MA0467.1_Crx/Jaspar

Match Rank:6
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:AACAACCTAATC-----
------CTAATCCTCTT

PH0025.1_Dmbx1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AACAACCTAATC-------
--NNNATTAATCCGNTTNA

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AACAACCTAATC-
GATAACATCCTAGTAG

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AACAACCTAATC---
-----YCTTATCWVN

MA0132.1_Pdx1/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AACAACCTAATC
------CTAATT