Information for motif7


Reverse Opposite:

p-value:1e-284
log p-value:-6.540e+02
Information Content per bp:1.640
Number of Target Sequences with motif4988.0
Percentage of Target Sequences with motif12.39%
Number of Background Sequences with motif2917.8
Percentage of Background Sequences with motif7.29%
Average Position of motif in Targets101.4 +/- 54.0bp
Average Position of motif in Background99.0 +/- 57.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:AGGTGTTAAH
AGGTGTTAAT

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.93
Offset:0
Orientation:forward strand
Alignment:AGGTGTTAAH
AGGTGTGAAM

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.90
Offset:0
Orientation:forward strand
Alignment:AGGTGTTAAH
AGGTGTCA--

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.87
Offset:-4
Orientation:forward strand
Alignment:----AGGTGTTAAH---
GAAAAGGTGTGAAAATT

MA0009.1_T/Jaspar

Match Rank:5
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--AGGTGTTAAH
CTAGGTGTGAA-

PH0164.1_Six4/Jaspar

Match Rank:6
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGTTAAH---
TNNNNGGTGTCATNTNT

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AGGTGTTAAH--
AACTAGCTGTCAATAC

PH0102.1_Meis1/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGGTGTTAAH--
AACGAGCTGTCAATAC

PB0109.1_Bbx_2/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGGTGTTAAH-----
NNNNCTGTTAACNNTNN

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGGTGTTAAH--
AAAGACCTGTCAATAC