Information for motif8


Reverse Opposite:

p-value:1e-274
log p-value:-6.316e+02
Information Content per bp:1.702
Number of Target Sequences with motif3687.0
Percentage of Target Sequences with motif9.16%
Number of Background Sequences with motif1964.4
Percentage of Background Sequences with motif4.91%
Average Position of motif in Targets99.6 +/- 52.7bp
Average Position of motif in Background100.8 +/- 56.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.96
Offset:2
Orientation:forward strand
Alignment:NTCACAGCAGGG--
--CACAGCAGGGGG

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-NTCACAGCAGGG--
CCACACAGCAGGAGA

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-NTCACAGCAGGG--
CCACACAGCAGGAGA

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-NTCACAGCAGGG--
GAGCACAGCAGGACA

MA0461.1_Atoh1/Jaspar

Match Rank:5
Score:0.70
Offset:4
Orientation:forward strand
Alignment:NTCACAGCAGGG
----CAGATGGC

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:NTCACAGCAGGG
-NAHCAGCTGD-

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:NTCACAGCAGGG
----CAGCTGNT

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:NTCACAGCAGGG
--CACAGN----

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.66
Offset:3
Orientation:forward strand
Alignment:NTCACAGCAGGG-
---NCAGCTGCTG

MA0048.1_NHLH1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:NTCACAGCAGGG-
-GCGCAGCTGCGT