Information for motif1


Reverse Opposite:

p-value:1e-755
log p-value:-1.740e+03
Information Content per bp:1.664
Number of Target Sequences with motif5094.0
Percentage of Target Sequences with motif22.27%
Number of Background Sequences with motif1349.9
Percentage of Background Sequences with motif9.22%
Average Position of motif in Targets99.3 +/- 53.0bp
Average Position of motif in Background102.7 +/- 65.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCHNA
TGTTTACTTT

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCHNA
TGTTTACTTT

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.92
Offset:0
Orientation:forward strand
Alignment:TGTTTRCHNA
TGTTTATTT-

MA0593.1_FOXP2/Jaspar

Match Rank:4
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTRCHNA
TNTGTTTACTT-

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:5
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---TGTTTRCHNA
NYYTGTTTACHN-

MA0148.3_FOXA1/Jaspar

Match Rank:6
Score:0.91
Offset:-4
Orientation:forward strand
Alignment:----TGTTTRCHNA-
TCCATGTTTACTTTG

MA0157.1_FOXO3/Jaspar

Match Rank:7
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCHNA
TGTTTACA--

MA0031.1_FOXD1/Jaspar

Match Rank:8
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTRCHNA
ATGTTTAC---

MA0047.2_Foxa2/Jaspar

Match Rank:9
Score:0.89
Offset:0
Orientation:forward strand
Alignment:TGTTTRCHNA--
TGTTTACTTAGG

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--TGTTTRCHNA
CNTGTTTACATA