| p-value: | 1e-136 |
| log p-value: | -3.149e+02 |
| Information Content per bp: | 1.518 |
| Number of Target Sequences with motif | 4013.0 |
| Percentage of Target Sequences with motif | 17.55% |
| Number of Background Sequences with motif | 1740.3 |
| Percentage of Background Sequences with motif | 11.89% |
| Average Position of motif in Targets | 98.7 +/- 53.8bp |
| Average Position of motif in Background | 97.9 +/- 91.3bp |
| Strand Bias (log2 ratio + to - strand density) | -0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.13 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer
| Match Rank: | 1 |
| Score: | 0.77
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | YRATYVGC
TAATTAGN |
|
|
|
NFY(CCAAT)/Promoter/Homer
| Match Rank: | 2 |
| Score: | 0.76
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -YRATYVGC-
CCGATTGGCT |
|
|
|
PH0097.1_Lhx6_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.75
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----YRATYVGC----
TCCACTAATTAGCGGTT |
|
|
|
PH0089.1_Isx/Jaspar
| Match Rank: | 4 |
| Score: | 0.75
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----YRATYVGC---
ACNNCTAATTAGNNNN |
|
|
|
MA0125.1_Nobox/Jaspar
| Match Rank: | 5 |
| Score: | 0.74
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | YRATYVGC
TAATTGGT |
|
|
|
PH0098.1_Lhx8/Jaspar
| Match Rank: | 6 |
| Score: | 0.74
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----YRATYVGC----
ACCCCTAATTAGCGGTG |
|
|
|
PH0127.1_Nobox/Jaspar
| Match Rank: | 7 |
| Score: | 0.74
| | Offset: | -6
| | Orientation: | reverse strand |
| Alignment: | ------YRATYVGC---
GNTNNCTAATTAGNNCG |
|
|
|
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer
| Match Rank: | 8 |
| Score: | 0.73
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---YRATYVGC
ADBTAATTAR- |
|
|
|
PH0024.1_Dlx5/Jaspar
| Match Rank: | 9 |
| Score: | 0.73
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----YRATYVGC----
GGGGTAATTAGCTCTG |
|
|
|
POL004.1_CCAAT-box/Jaspar
| Match Rank: | 10 |
| Score: | 0.72
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | YRATYVGC----
TGATTGGCTANN |
|
|
|
