Information for motif17


Reverse Opposite:

p-value:1e-81
log p-value:-1.880e+02
Information Content per bp:1.960
Number of Target Sequences with motif211.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif25.9
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets106.9 +/- 56.3bp
Average Position of motif in Background100.1 +/- 127.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0108.1_Atf1_2/Jaspar

Match Rank:1
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGATCGTC----
NTTATTCGTCATNC

MA0078.1_Sox17/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGATCGTC
CTCATTGTC

PH0017.1_Cux1_2/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CGATCGTC----
TAGTGATCATCATTA

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGATCGTC-
---ACGTCA

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CGATCGTC
NTATYGATCH--

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CGATCGTC-----
NNANTGGTGGTCTTNNN

MA0077.1_SOX9/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGATCGTC-
CCATTGTTC

PH0044.1_Homez/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CGATCGTC------
AAAACATCGTTTTTAAG

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGATCGTC--
CCATTGTTNY

MA0131.1_HINFP/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CGATCGTC---
-TAACGTCCGC