Information for motif21


Reverse Opposite:

p-value:1e-44
log p-value:-1.031e+02
Information Content per bp:1.530
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets102.3 +/- 52.8bp
Average Position of motif in Background97.7 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0077.1_Spdef_1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CGTATCCGGA-----
GTACATCCGGATTTTT

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGTATCCGGA
NRYTTCCGGY

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGTATCCGGA
NRYTTCCGGH

PB0011.1_Ehf_1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGTATCCGGA-----
AGGACCCGGAAGTAA

MA0028.1_ELK1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGTATCCGGA--
--CTTCCGGNNN

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CGTATCCGGA---
NTNNCGTATCCAAGTNN

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CGTATCCGGA----
----RCCGGAAGTD

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGTATCCGGA---
---ANCCGGAAGT

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGTATCCGGA---
---ANCAGGATGT

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CGTATCCGGA---
---AACCGGAAGT