Information for motif23


Reverse Opposite:

p-value:1e-38
log p-value:-8.947e+01
Information Content per bp:1.530
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets87.8 +/- 56.4bp
Average Position of motif in Background53.4 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0058.2_MAX/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGCACAAG-
AAGCACATGG

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CGCACAAG---
CGAAGCACACAAAATA

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CGCACAAG----
NNTTTGCACACGGCCC

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGCACAAG-----
CTCACACAATGGCGC

MA0147.2_Myc/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGCACAAG-
AAGCACATGG

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGCACAAG-----
NNAGGGACAAGGGCNC

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CGCACAAG---
AGCGGCACACACGCAA

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGCACAAG--
RNAACAATGG

MA0442.1_SOX10/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGCACAAG-
---ACAAAG

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGCACAAG
AGCCACTCAAG