Information for motif3


Reverse Opposite:

p-value:1e-375
log p-value:-8.636e+02
Information Content per bp:1.731
Number of Target Sequences with motif3767.0
Percentage of Target Sequences with motif16.47%
Number of Background Sequences with motif1180.1
Percentage of Background Sequences with motif8.06%
Average Position of motif in Targets99.1 +/- 52.9bp
Average Position of motif in Background96.0 +/- 138.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-GCCCCGCCCM-
GGCCCCGCCCCC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCGCCCM--
NAGCCCCGCCCCCN

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.93
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCCM-
GCCCCGCCCCC

MA0599.1_KLF5/Jaspar

Match Rank:4
Score:0.92
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCCM
GCCCCGCCCC

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.91
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCCM-----
GCCCCGCCCCCTCCC

MA0039.2_Klf4/Jaspar

Match Rank:6
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCM
GCCCCACCCA

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCM
GCCMCRCCCH

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGCCCM---
TCGACCCCGCCCCTAT

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GCCCCGCCCM-----
ATCCCCGCCCCTAAAA

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GCCCCGCCCM-----
TCACCCCGCCCCAAATT