Information for motif1


Reverse Opposite:

p-value:1e-801
log p-value:-1.846e+03
Information Content per bp:1.651
Number of Target Sequences with motif5288.0
Percentage of Target Sequences with motif23.03%
Number of Background Sequences with motif2538.3
Percentage of Background Sequences with motif9.44%
Average Position of motif in Targets100.0 +/- 52.8bp
Average Position of motif in Background100.7 +/- 61.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TGTTTACWYW
TGTTTACTTT

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:TGTTTACWYW
TGTTTACTTT

MA0148.3_FOXA1/Jaspar

Match Rank:3
Score:0.95
Offset:-4
Orientation:forward strand
Alignment:----TGTTTACWYW-
TCCATGTTTACTTTG

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:4
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--TGTTTACWYW
CNTGTTTACATA

MA0047.2_Foxa2/Jaspar

Match Rank:5
Score:0.94
Offset:0
Orientation:forward strand
Alignment:TGTTTACWYW--
TGTTTACTTAGG

MA0593.1_FOXP2/Jaspar

Match Rank:6
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTACWYW
TNTGTTTACTT-

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.93
Offset:0
Orientation:forward strand
Alignment:TGTTTACWYW
TGTTTATTT-

Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTACWYW-----
NSTGTTTRCWCAGBNNN

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:9
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---TGTTTACWYW
NYYTGTTTACHN-

MA0031.1_FOXD1/Jaspar

Match Rank:10
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTACWYW
ATGTTTAC---