Information for motif13


Reverse Opposite:

p-value:1e-28
log p-value:-6.619e+01
Information Content per bp:1.885
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.6 +/- 49.8bp
Average Position of motif in Background131.7 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CTAACAACAG
NAAACCACAG

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTAACAACAG-
-AAACCACAGC

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTAACAACAG-
-AAACCACANN

MA0133.1_BRCA1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTAACAACAG
---ACAACAC

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTAACAACAG-
AAAAATAACAAACGG

MA0002.2_RUNX1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTAACAACAG--
-AAACCACAGAN

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTAACAACAG-
-GAACAATGGN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTAACAACAG--
NWAACCACADNN

MA0511.1_RUNX2/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTAACAACAG-----
CAAACCACAAACCCC

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTAACAACAG
RNAACAATGG