| p-value: | 1e-27 |
| log p-value: | -6.277e+01 |
| Information Content per bp: | 1.517 |
| Number of Target Sequences with motif | 25.0 |
| Percentage of Target Sequences with motif | 0.11% |
| Number of Background Sequences with motif | 1.9 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 105.2 +/- 47.7bp |
| Average Position of motif in Background | 102.3 +/- 31.1bp |
| Strand Bias (log2 ratio + to - strand density) | -0.4 |
| Multiplicity (# of sites on avg that occur together) | 1.04 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer
| Match Rank: | 1 |
| Score: | 0.86
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | NNCCATATAWGG
TNCCATATATGG |
|
|
|
PB0078.1_Srf_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.82
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | NNCCATATAWGG--
TNCCATATATGGNA |
|
|
|
MF0008.1_MADS_class/Jaspar
| Match Rank: | 3 |
| Score: | 0.82
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | NNCCATATAWGG
--CCATATATGG |
|
|
|
MA0083.2_SRF/Jaspar
| Match Rank: | 4 |
| Score: | 0.80
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---NNCCATATAWGG---
CATGCCCAAATAAGGCAA |
|
|
|
TATA-Box(TBP)/Promoter/Homer
| Match Rank: | 5 |
| Score: | 0.71
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | NNCCATATAWGG
GNCTATAAAAGG |
|
|
|
MA0109.1_Hltf/Jaspar
| Match Rank: | 6 |
| Score: | 0.63
| | Offset: | 4
| | Orientation: | reverse strand |
| Alignment: | NNCCATATAWGG--
----NNATAAGGNN |
|
|
|
TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer
| Match Rank: | 7 |
| Score: | 0.57
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | NNCCATATAWGG---
GGTCANYTGAGGWCA |
|
|
|
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer
| Match Rank: | 8 |
| Score: | 0.56
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | NNCCATATAWGG
--CTATTTTTGG |
|
|
|
POL012.1_TATA-Box/Jaspar
| Match Rank: | 9 |
| Score: | 0.56
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | NNCCATATAWGG-----
--GTATAAAAGGCGGGG |
|
|
|
MA0108.2_TBP/Jaspar
| Match Rank: | 10 |
| Score: | 0.56
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | NNCCATATAWGG-----
--GTATAAAAGGCGGGG |
|
|
|
