Information for motif15


Reverse Opposite:

p-value:1e-24
log p-value:-5.739e+01
Information Content per bp:1.697
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets87.0 +/- 47.8bp
Average Position of motif in Background166.1 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGCATTCGCCAC
AGATGCAATCCC---

PB0171.1_Sox18_2/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGCATTCGCCAC
NNNNTGAATTCANNNC

PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCATTCGCCAC---
NNAATTAGTCACGGT

MA0130.1_ZNF354C/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TGCATTCGCCAC
------ATCCAC

NRF1/Promoter/Homer

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TGCATTCGCCAC
GTGCGCATGCGC---

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TGCATTCGCCAC
NNTTTGCACACGGCCC

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGCATTCGCCAC-
TTGCCATGGCAACN

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TGCATTCGCCAC
NNTGTGGATTSS----

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGCATTCGCCAC-
TTGCCATGGCAACC

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TGCATTCGCCAC--
GTTGCCATGGCAACCG