| p-value: | 1e-16 |
| log p-value: | -3.832e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 22.0 |
| Percentage of Target Sequences with motif | 0.10% |
| Number of Background Sequences with motif | 3.0 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 92.3 +/- 49.0bp |
| Average Position of motif in Background | 136.1 +/- 62.0bp |
| Strand Bias (log2 ratio + to - strand density) | -0.7 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer
| Match Rank: | 1 |
| Score: | 0.67
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GCTTGACAAA----
ACCGTGACTAATTNN |
|
|
|
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 2 |
| Score: | 0.66
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | GCTTGACAAA
-CTTGGCAA- |
|
|
|
MA0067.1_Pax2/Jaspar
| Match Rank: | 3 |
| Score: | 0.63
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GCTTGACAAA
NCGTGACN-- |
|
|
|
MA0142.1_Pou5f1::Sox2/Jaspar
| Match Rank: | 4 |
| Score: | 0.61
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----GCTTGACAAA-
ATTTGCATAACAAAG |
|
|
|
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
| Match Rank: | 5 |
| Score: | 0.60
| | Offset: | 4
| | Orientation: | reverse strand |
| Alignment: | GCTTGACAAA--
----RACAAWGG |
|
|
|
MA0442.1_SOX10/Jaspar
| Match Rank: | 6 |
| Score: | 0.60
| | Offset: | 5
| | Orientation: | reverse strand |
| Alignment: | GCTTGACAAA-
-----ACAAAG |
|
|
|
PB0166.1_Sox12_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.59
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GCTTGACAAA-----
AAACAGACAAAGGAAT |
|
|
|
MA0084.1_SRY/Jaspar
| Match Rank: | 8 |
| Score: | 0.58
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | GCTTGACAAA
-GTAAACAAT |
|
|
|
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 9 |
| Score: | 0.57
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GCTTGACAAA
NTGATTGACAGN |
|
|
|
PH0105.1_Meis3/Jaspar
| Match Rank: | 10 |
| Score: | 0.56
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GCTTGACAAA-----
GTATTGACAGGTNNTT |
|
|
|
