Information for motif22


Reverse Opposite:

p-value:1e-13
log p-value:-3.034e+01
Information Content per bp:1.479
Number of Target Sequences with motif404.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif320.3
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets99.6 +/- 55.8bp
Average Position of motif in Background106.4 +/- 64.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---BGTTTTBTYT----
NNNNTTTTTTTTTNAAC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:BGTTTTBTYT------
--TTTTTTTTCNNGTN

MA0514.1_Sox3/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:BGTTTTBTYT-
-CCTTTGTTTT

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---BGTTTTBTYT----
TNNTCCTTTGTTCTNNT

MA0515.1_Sox6/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:BGTTTTBTYT-
-CCATTGTTTT

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---BGTTTTBTYT----
NNNTCCTTTGTTCTNNN

MA0481.1_FOXP1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:BGTTTTBTYT-------
--CTTTGTTTACTTTTN

PB0116.1_Elf3_2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--BGTTTTBTYT-----
GNATTTTTTTTTTGANC

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--BGTTTTBTYT----
ANTCCTTTGTCTNNNN

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:BGTTTTBTYT------
NNTTTTGTTTTGATNT