Information for motif3


Reverse Opposite:

p-value:1e-239
log p-value:-5.506e+02
Information Content per bp:1.658
Number of Target Sequences with motif2180.0
Percentage of Target Sequences with motif9.49%
Number of Background Sequences with motif1175.4
Percentage of Background Sequences with motif4.37%
Average Position of motif in Targets100.2 +/- 53.5bp
Average Position of motif in Background99.5 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:ACATTCCWNN
RCATTCCWGG

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:ACATTCCWNN
GCATTCCAGN

MA0090.1_TEAD1/Jaspar

Match Rank:3
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-ACATTCCWNN-
CACATTCCTCCG

MA0081.1_SPIB/Jaspar

Match Rank:4
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:ACATTCCWNN
---TTCCTCT

MA0598.1_EHF/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:forward strand
Alignment:ACATTCCWNN
-CCTTCCTG-

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACATTCCWNN-
-ACTTCCTGBT

MA0136.1_ELF5/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ACATTCCWNN
TACTTCCTT-

MA0101.1_REL/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ACATTCCWNN
GGGGATTTCC---

NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ACATTCCWNN
GGAAATTCCC--

MA0156.1_FEV/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ACATTCCWNN
-ATTTCCTG-