| p-value: | 1e-106 |
| log p-value: | -2.453e+02 |
| Information Content per bp: | 1.754 |
| Number of Target Sequences with motif | 795.0 |
| Percentage of Target Sequences with motif | 3.46% |
| Number of Background Sequences with motif | 384.9 |
| Percentage of Background Sequences with motif | 1.43% |
| Average Position of motif in Targets | 102.9 +/- 53.8bp |
| Average Position of motif in Background | 100.5 +/- 57.6bp |
| Strand Bias (log2 ratio + to - strand density) | -0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.04 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
MA0509.1_Rfx1/Jaspar
| Match Rank: | 1 |
| Score: | 0.94
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --TKCCATGGCAAC
GTTGCCATGGCAAC |
|
|
|
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 2 |
| Score: | 0.93
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TKCCATGGCAAC-
TTGCCATGGCAACN |
|
|
|
MA0600.1_RFX2/Jaspar
| Match Rank: | 3 |
| Score: | 0.92
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --TKCCATGGCAAC-----
GTTGCCATGGCAACCGCGG |
|
|
|
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 4 |
| Score: | 0.92
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TKCCATGGCAAC-
TTGCCATGGCAACC |
|
|
|
MA0510.1_RFX5/Jaspar
| Match Rank: | 5 |
| Score: | 0.89
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | TKCCATGGCAAC---
CTCCCTGGCAACAGC |
|
|
|
PB0055.1_Rfx4_1/Jaspar
| Match Rank: | 6 |
| Score: | 0.89
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | TKCCATGGCAAC---
TACCATAGCAACGGT |
|
|
|
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 7 |
| Score: | 0.88
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | TKCCATGGCAAC--
--SCCTAGCAACAG |
|
|
|
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
| Match Rank: | 8 |
| Score: | 0.87
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---TKCCATGGCAAC
KGTTGCCATGGCAAC |
|
|
|
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
| Match Rank: | 9 |
| Score: | 0.85
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --TKCCATGGCAAC--
GTTGCCATGGCAACCG |
|
|
|
PB0054.1_Rfx3_1/Jaspar
| Match Rank: | 10 |
| Score: | 0.83
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----TKCCATGGCAAC-------
TGTGACCCTTAGCAACCGATTAA |
|
|
|
