Information for motif10


Reverse Opposite:

p-value:1e-193
log p-value:-4.444e+02
Information Content per bp:1.704
Number of Target Sequences with motif5904.0
Percentage of Target Sequences with motif22.87%
Number of Background Sequences with motif2787.0
Percentage of Background Sequences with motif15.78%
Average Position of motif in Targets100.1 +/- 55.3bp
Average Position of motif in Background99.7 +/- 68.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0077.1_SOX9/Jaspar

Match Rank:1
Score:0.91
Offset:1
Orientation:forward strand
Alignment:CCBATTGT--
-CCATTGTTC

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.89
Offset:1
Orientation:forward strand
Alignment:CCBATTGT-
-CCWTTGTY

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:3
Score:0.89
Offset:1
Orientation:forward strand
Alignment:CCBATTGT---
-CCATTGTTNY

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.88
Offset:0
Orientation:forward strand
Alignment:CCBATTGT--
NCCATTGTTC

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--CCBATTGT-----
NNNCCATTGTGTNAN

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----CCBATTGT-----
TGTTCCCATTGTGTACT

MA0078.1_Sox17/Jaspar

Match Rank:7
Score:0.86
Offset:0
Orientation:forward strand
Alignment:CCBATTGT-
CTCATTGTC

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--CCBATTGT-------
CNNNTATTGTTCNNNNN

MA0143.3_Sox2/Jaspar

Match Rank:9
Score:0.85
Offset:1
Orientation:forward strand
Alignment:CCBATTGT-
-CCTTTGTT

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---CCBATTGT-----
ANNTCCATTGTTCNNN