Information for motif11


Reverse Opposite:

p-value:1e-152
log p-value:-3.517e+02
Information Content per bp:1.835
Number of Target Sequences with motif5800.0
Percentage of Target Sequences with motif22.47%
Number of Background Sequences with motif2852.4
Percentage of Background Sequences with motif16.15%
Average Position of motif in Targets99.9 +/- 54.9bp
Average Position of motif in Background101.6 +/- 75.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:AGGTGTGA--
AGGTGTGAAM

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.91
Offset:0
Orientation:forward strand
Alignment:AGGTGTGA
AGGTGTCA

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.90
Offset:-4
Orientation:forward strand
Alignment:----AGGTGTGA-----
GAAAAGGTGTGAAAATT

MA0009.1_T/Jaspar

Match Rank:4
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--AGGTGTGA-
CTAGGTGTGAA

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:5
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:AGGTGTGA--
AGGTGTTAAT

MA0103.2_ZEB1/Jaspar

Match Rank:6
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-AGGTGTGA
CAGGTGAGG

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGTGA
NNCAGGTGNN-

PH0164.1_Six4/Jaspar

Match Rank:8
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGTGA-----
TNNNNGGTGTCATNTNT

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------AGGTGTGA---
ATCCACAGGTGCGAAAA

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AGGTGTGA----
GCGGAGGTGTCGCCTC