Information for motif13


Reverse Opposite:

p-value:1e-150
log p-value:-3.472e+02
Information Content per bp:1.707
Number of Target Sequences with motif124.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets98.3 +/- 54.6bp
Average Position of motif in Background74.1 +/- 39.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0146.2_Zfx/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GGCCCGAGCCGC
CAGGCCNNGGCCNN

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGCCCGAGCCGC
--AGCGCGCC--

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGCCCGAGCCGC
WTGSCCTSAGGS--

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGCCCGAGCCGC
ATGCCCTGAGGC--

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGCCCGAGCCGC
-----CAGCC--

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGCCCGAGCCGC-
ATTGCCTGAGGCAAT

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGCCCGAGCCGC
GGGGGCGGGGCC--

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGCCCGAGCCGC
---CGGAGC---

MA0003.2_TFAP2A/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCCCGAGCCGC--
TGCCCTGAGGCANTN

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GGCCCGAGCCGC
--CCCCCCCC--