Information for motif17


Reverse Opposite:

p-value:1e-107
log p-value:-2.479e+02
Information Content per bp:1.674
Number of Target Sequences with motif335.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif51.3
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets102.0 +/- 55.5bp
Average Position of motif in Background107.6 +/- 84.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGGAGACCGA
CGGAGC----

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CGGAGACCGA--
CTACTTGGATACGGAAT

MA0056.1_MZF1_1-4/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGGAGACCGA
TGGGGA----

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CGGAGACCGA-
NNNACCGAGAGTNNN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGGAGACCGA
ACTGAAACCA-

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGAGACCGA
-CCAGACAG-

MA0028.1_ELK1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CGGAGACCGA
GAGCCGGAAG----

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGGAGACCGA
RCCGGAARYN--

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGGAGACCGA
DCCGGAARYN--

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CGGAGACCGA-
GNNACCGAGAATNNN