Information for motif18


Reverse Opposite:

p-value:1e-105
log p-value:-2.420e+02
Information Content per bp:1.940
Number of Target Sequences with motif95.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets91.8 +/- 56.6bp
Average Position of motif in Background158.3 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0506.1_NRF1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCGCAATCGC
TGCGCAGGCGC

NRF1/Promoter/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCGCAATCGC--
GCGCATGCGCAC

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCGCAATCGC
CTGCGCATGCGC

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCGCAATCGC
AGATGCAATCCC

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCGCAATCGC---
TCCGCCCCCGCATT

MA0162.2_EGR1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCGCAATCGC-
CCCCCGCCCCCGCC

PB0127.1_Gata6_2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCGCAATCGC----
GCGGCGATATCGCAGCG

MA0076.2_ELK4/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCGCAATCGC
NCCGGAAGTGG

MA0062.2_GABPA/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCGCAATCGC-
CCGGAAGTGGC

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCGCAATCGC
RCCGGAARYN-