Information for motif20


Reverse Opposite:

p-value:1e-80
log p-value:-1.843e+02
Information Content per bp:1.699
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets119.2 +/- 55.6bp
Average Position of motif in Background176.3 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGCGCCCAGCGC--
GCCGCGCAGTGCGT

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AGCGCCCAGCGC
AGCTCGGCGCCAAAAGC

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGCGCCCAGCGC--
--GGCCCCGCCCCC

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:AGCGCCCAGCGC
------CAGCC-

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGCGCCCAGCGC
TTGGGGGCGCCCCTAG-

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGCGCCCAGCGC
----CACAGN--

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AGCGCCCAGCGC
CCTTCGGCGCCAAAAGG

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGCGCCCAGCGC
-GCTCCG-----

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGCGCCCAGCGC-
-GTCCCCAGGGGA

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGCGCCCAGCGC----
-CCACACAGCAGGAGA