Information for motif21


Reverse Opposite:

p-value:1e-78
log p-value:-1.802e+02
Information Content per bp:1.740
Number of Target Sequences with motif1361.0
Percentage of Target Sequences with motif5.27%
Number of Background Sequences with motif540.3
Percentage of Background Sequences with motif3.06%
Average Position of motif in Targets99.1 +/- 56.8bp
Average Position of motif in Background101.9 +/- 76.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0133.1_BRCA1/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCCGCKTT--
---GTGTTGN

PB0179.1_Sp100_2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCCGCKTT----
TCCGTCGCTTAAAAG

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCCGCKTT
--TGCGTG

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCCGCKTT----
--TGGTTTCAGT

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCCGCKTT
--NGCTN-

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCCGCKTT-
-NGGGATTA

PB0147.1_Max_2/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCKTT----
NNGTCGCGTGNCAC

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCCGCKTT
TGTCGGTT-

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCCGCKTT-----
---CCTTTGATGT

PH0157.1_Rhox11_1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCCGCKTT-------
AAGACGCTGTAAAGCGA