Information for motif7


Reverse Opposite:

p-value:1e-212
log p-value:-4.902e+02
Information Content per bp:1.903
Number of Target Sequences with motif1186.0
Percentage of Target Sequences with motif4.59%
Number of Background Sequences with motif284.6
Percentage of Background Sequences with motif1.61%
Average Position of motif in Targets99.0 +/- 53.2bp
Average Position of motif in Background95.8 +/- 126.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--STAGAGGGCG-----
NNNAAGGGGGCGGGNNN

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----STAGAGGGCG------
GCCASCAGGGGGCGCYVNNG

MA0139.1_CTCF/Jaspar

Match Rank:3
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------STAGAGGGCG---
TGGCCACCAGGGGGCGCTA

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:4
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------STAGAGGGCG----
TGGCCACCAGGTGGCACTNT

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--STAGAGGGCG--
ANTGCGGGGGCGGN

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:STAGAGGGCG--
NGCGTGGGCGGR

MA0516.1_SP2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-STAGAGGGCG----
GGGNGGGGGCGGGGC

MA0162.2_EGR1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:STAGAGGGCG----
GGCGGGGGCGGGGG

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:STAGAGGGCG------
--AGGGGGCGGGGCTG

PB0143.1_Klf7_2/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:STAGAGGGCG-------
NNNTNGGGCGTATNNTN