Information for motif12


Reverse Opposite:

p-value:1e-42
log p-value:-9.841e+01
Information Content per bp:1.890
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets106.4 +/- 51.9bp
Average Position of motif in Background35.5 +/- 4.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0155.1_Osr2_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TASGTGGCAG--
NNTGTAGGTAGCANNT

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TASGTGGCAG--
NNNTTAGGTAGCNTNT

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TASGTGGCAG----
-AGGTGNCAGACAG

Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TASGTGGCAG---
-AGGTGHCAGACA

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TASGTGGCAG
-AGGTGTCA-

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TASGTGGCAG
--CTTGGCAA

MA0104.3_Mycn/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TASGTGGCAG
CACGTGGC--

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TASGTGGCAG
TACGTGCV--

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TASGTGGCAG
GGGTACGTGC---

MA0100.2_Myb/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TASGTGGCAG----
----TGGCAGTTGN