Information for motif15


Reverse Opposite:

p-value:1e-27
log p-value:-6.282e+01
Information Content per bp:1.783
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets99.5 +/- 54.6bp
Average Position of motif in Background80.9 +/- 52.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0507.1_POU2F2/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CAATTGCATA-
TTCATTTGCATAT

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:CAATTGCATA-
-ATTTGCATAT

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.80
Offset:1
Orientation:forward strand
Alignment:CAATTGCATA-
-ATTTGCATAA

PH0145.1_Pou2f3/Jaspar

Match Rank:4
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---CAATTGCATA---
TNTAATTTGCATACNA

PH0144.1_Pou2f2/Jaspar

Match Rank:5
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---CAATTGCATA---
TNTAATTTGCATANNN

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:6
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CAATTGCATA-
--ATTGCATAA

OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAATTGCATA------
-ATTTGCATAACAATG

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAATTGCATA-----
AAAATATGCATAATAAA

MA0102.3_CEBPA/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAATTGCATA---
--ATTGCACAATA

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAATTGCATA-
GGGATTGCATNN